BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F10LP1|AL425905
(843 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1603 1569 0.0
>3x_Contig1603
Length = 12146
Score = 1569 bits (791), Expect = 0.0
Identities = 833/845 (98%), Gaps = 2/845 (0%)
Strand = Plus / Minus
Query: 1 gatcaaatcgcgttaatataaatactacatattaaatagttactattcatgtatatagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gatcaaatcgcgttaatataaatactacatattaaatagttactattcatgtatatagca 842
Query: 61 attttctatctctcggggttcatgtgcgtgaaggttaggaaatttctcgaataagcaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 attttctatctctcggggttcatgtgcgtgaaggttaggaaatttctcgaataagcaaga 782
Query: 121 aaatgatataaagttcaagtaatataaaggatacatacataaaagttgttgggaaattac 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 781 aaatgatataaagttcaagtaatataaaggatacatacataaaagaagttgggaaaacac 722
Query: 181 actcaacctttgtaggacggctttctgttccaagaaaatggtactcctatctactcacac 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 acacaacctttgtaggacggctttctgttccaagaaaatggtactcctatctactcacac 662
Query: 241 tctgacaaagtacagcaaacaggaattgtaaaatgtttgctgccatcgcctccgggaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tctgacaaagtacagcaaacaggaattgtaaaatgtttgctgccatcgcctccgggaacc 602
Query: 301 ccttacaattatccactgaagtacctaattctaatggtttgcagcatacaatagtattat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccttacaattatccactgaagtacctaattctaatggtttgcagcatacaatagtattat 542
Query: 361 catcaacaaagccaaaatcatactcacatatcactttgtttatactaccaaacgtaacat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 catcaacaaagccaaaatcatactcacatatcactttgtttatactaccaaacgtaacat 482
Query: 421 tccctcaggaattccttgcgacagtgtattttaaactaaatccagcggaggacttcaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tccctcaggaattccttgcgacagtgtattttaaactaaatccagcggaggacttcaaat 422
Query: 481 tatttggatacttgggtaatgagaaaccgagtgcaatttttaaggtaaaacttccacagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatttggatacttgggtaatgagaaaccgagtgcaatttttaaggtaaaacttccacagg 362
Query: 541 ccaatgttgggaatggtgtgacagctaacccttcagatggattaggtgaaattgatatgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ccaatgttgggaatggtgtgacagctaacccttcagatggattaggtgaaattgatatgg 302
Query: 601 aagacgatgtaatgacagatgacctcaatggtgccaacgcaaatcacaatatttcgcagt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aagacgatgtaatgacagatgacctcaatggtgccaacgcaaatcacaatatttcgcagt 242
Query: 661 taatcataggaatttccattgaaccaagaaatgatgccactgccaagcttgagcagtgga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 taatcataggaatttccattgaaccaagaaatgatgccactgccaagcttgagcagtgga 182
Query: 721 aagcggasaacgctgcattgagttcgagcgctggtgccg-gtgcaatggtactatcta-a 778
||||||| | |||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 181 aagcggagcaagctgcattgagttcgagcgctggtgccgtgtgcaatggtactatctaga 122
Query: 779 gaattctgtacaaatcctaactgcaggagctcttgcgaaacaatatcctgtggtaacaca 838
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 121 gaattctgtacaaatcctaactgcaggagctcttgcgaaacaatatcctgtggtttcaca 62
Query: 839 agaat 843
|||||
Sbjct: 61 agaat 57
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5897
Number of Sequences: 1807
Number of extensions: 5897
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 843
length of database: 10,358,551
effective HSP length: 16
effective length of query: 827
effective length of database: 10,329,639
effective search space: 8542611453
effective search space used: 8542611453
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)